Home / Services / Synthetic Biology Chassis Development / Fungal Chassis Engineering / Yeast Genome Editing & Metabolic Engineering Solutions / Yeast Synthetic Biology and Metabolic Engineering Services

Yeast Synthetic Biology and Metabolic Engineering Services

CD Biosynsis offers comprehensive Yeast Synthetic Biology and Metabolic Engineering Services designed to transform yeast, primarily Saccharomyces cerevisiae, into high-performance cell factories for sustainable biomanufacturing. As a premier platform for complex pathway assembly and protein expression, yeast is ideal for producing high-value compounds. We provide an integrated approach covering the entire Design-Build-Test-Learn (DBTL) cycle, utilizing advanced genome editing, high-throughput screening, and AI-guided optimization. Our expertise enables the precise engineering of yeast metabolism to enhance flux toward desired products, minimize byproducts, and improve stress tolerance for industrial scale-up.

Get a Quote    
Overview Services Offered Workflow Core Technologies Key Applications Advantages FAQs Contact Us

Engineering Yeast for Industrial Excellence

Yeast serves as a versatile microbial host, capable of performing complex eukaryotic functions such as proper protein folding and post-translational modifications. Metabolic engineering focuses on rerouting the cell's native biochemistry to maximize the production of a target molecule. Our synthetic biology approach systematizes this process, treating the cell as an engineering problem. We design and assemble entire genetic circuits and pathways, integrate them into the yeast genome, and systematically optimize their performance using cutting-edge screening technologies, ensuring rapid attainment of commercially relevant titers and yields.

Integrated Yeast Engineering Solutions

Pathway Design and Synthesis Metabolic Flux Optimization Advanced Screening and Validation

Rational Design and Construction

Assembling Complex Genetic Systems

De Novo Pathway Design

Computational design of non-native metabolic pathways for target molecules, including enzyme selection, codon optimization, and modular assembly.

Complex DNA Synthesis and Assembly

Synthesis of large DNA fragments or entire chromosomes for pathway construction, often utilizing Yeast Homologous Recombination (HR) for high-efficiency assembly.

Promoter and Terminator Libraries

Creation and utilization of characterized libraries of regulatory elements to finely tune the expression level of every gene in a pathway.

Maximizing Product Yield and Efficiency

Targeted Engineering Strategies

Host Strain Chassis Optimization

Knockout of competing pathways, introduction of push-pull mechanisms, and redirection of native carbon flux toward the desired metabolite precursor.

Subcellular Localization Engineering

Targeting enzymes to specific yeast organelles (e.g., mitochondria, peroxisomes) to enhance local concentration and optimize pathway efficiency.

Transport Engineering

Modifying membrane transporters to increase uptake of feedstock or accelerate export of the final product, preventing cellular toxicity.

Data-Driven Strain Refinement

Testing and Learning at Scale

High-Throughput Screening (HTS)

Automated screening of large yeast libraries using robotics and biosensors to quickly identify high-performing variants.

Metabolic Profiling and Flux Analysis

Quantitative metabolomics (LC-MS) to identify pathway bottlenecks and measure metabolic flux, guiding the next engineering steps.

Bioreactor Validation

Testing engineered strains in controlled miniature bioreactors to validate performance under simulated industrial conditions.

Enabling Technologies for Yeast Engineering

CRISPR/Cas9 Multiplexing

Efficient simultaneous editing of multiple genomic sites for rapid pathway integration and host chassis modification.

Automated HTS and Biosensors

Robotic systems coupled with yeast-specific fluorescent biosensors for fast, quantitative screening of thousands of clones.

AI-Guided Design (ML/BO)

Machine Learning and Bayesian Optimization to rationally design experimental variants and predict optimal genetic configurations.

Yeast as a Cell Factory

Production of Bio-Chemicals

Engineering yeast for the high-yield production of terpenes, fatty acids, alcohols, and polyketides.

Therapeutic Protein Expression

Using yeast to express complex proteins requiring glycosylation or other post-translational modifications, like insulin or vaccines.

Sustainable Bioplastics and Polymers

Metabolically engineering yeast to produce precursors for sustainable polymers and materials.

The Integrated DBTL Cycle for Yeast Engineering

A closed-loop system for continuous strain improvement.

Design (In Silico)

Build (Genetic Engineering)

Test (HTS & Characterization)

Learn (Optimization & Data)

Pathway Modeling: Define the synthetic pathway and use computational tools (AI/ML, FBA) to select optimal genes and regulatory parts.

Design of Experiments (DoE): Rationally select the best genetic variants to synthesize.

DNA Assembly: Synthesize and assemble all genetic components (genes, promoters) into large pathways.

Yeast Editing: Integrate the pathway into the yeast genome using highly efficient CRISPR/Cas9 methods.

Initial Screen: Use HTS robotics to screen thousands of transformants for basic performance metrics.

Deep Analysis: Validate top strains using LC-MS and metabolic profiling to identify bottlenecks.

Data Feedback: Feed all Test results back into the AI/ML model.

Refined Design: The model suggests refined targets for the next round of Build (e.g., specific promoter adjustments or enzyme mutations).

Key Benefits of Our Yeast Engineering Platform

End-to-End DBTL Solution

           

A seamless, integrated process from computational design to validated, scale-ready strain.

Predictive Accuracy (AI/ML)

           

Leveraging machine learning to drastically reduce the number of necessary experimental cycles and increase success probability.

Scarless Pathway Integration

           

High expertise in marker-free and stable chromosomal integration, critical for industrial IP and regulatory compliance.

Accelerated Titer Improvement

           

Systematic optimization using omics data quickly resolves bottlenecks, leading to faster increases in final product yield.

Client Testimonials on Yeast Metabolic Engineering

   
   

"The integrated approach, combining CRISPR editing with metabolic profiling, allowed us to precisely identify and fix the flux bottleneck in our key pathway, resulting in a 40% titer increase."

Dr. Samuel Liu, R&D Manager, Specialty Chemicals

"Their expertise in subcellular localization engineering successfully rerouted our synthesis pathway to the peroxisome, significantly reducing toxicity and improving overall yield."

Ms. Clara Dubois, Lead Bioengineer, Sustainable Materials

"The AI-guided DoE reduced our optimization cycles from five to two. This predictive power saved us months and substantial costs in our synthetic cannabinoid project."

Mr. Ben Jacobs, CTO, Bio-Pharmaceutical Startup

"We commissioned CD Biosynsis to support an intricate gene editing project with multiple targets. Their talent in producing high-quality work in a short period of time was impressive. Their solutions were custom made to suit our needs, and they went above and beyond to ensure our experiments worked. Their support has been a great asset to our research department and we look forward to further working with them."

Dr. Raj Patel, Principal Investigator, Department of Molecular Biology

"As a pharmaceutical company working to discover new cancer therapies, we require accurate, trustworthy gene editing solutions. CD Biosynsis did more than what we expected when it came to providing strong, accurate CRISPR/Cas9 solutions for our preclinical research. Their technical support team was excellent and responsive, and they quickly replied to our questions. This alliance has been pivotal in helping us move our drug pipeline forward. Thank you, CD Biosynsis, for your amazing service!"

Dr. Clara Rodriguez, Chief Scientist, AstraZeneca Pharmaceuticals, Spain

   
   
   
           
   

FAQs about Yeast Synthetic Biology and Metabolic Engineering

Still have questions?

Contact Us

Why is yeast a preferred host for complex metabolic engineering?

Yeast is eukaryotic, meaning it can perform complex post-translational modifications (like glycosylation) and compartmentalize pathways within organelles, which is crucial for producing complex natural products or therapeutic proteins.

What is the significance of the DBTL cycle in your service?

DBTL (Design-Build-Test-Learn) is our systematic, iterative framework. It ensures that every engineering cycle is informed by the previous results, moving away from trial-and-error toward a rational, accelerated optimization process.

How do you identify pathway bottlenecks in yeast?

We use quantitative metabolic profiling (LC-MS) to measure intermediate metabolites. A high concentration of an intermediate indicates a bottleneck (a slow enzyme) immediately downstream, directing the next engineering effort.

Can you engineer yeast strains for improved stress tolerance?

Yes. By targeting genes related to cell wall integrity, osmotic pressure, or redox balance, we can engineer yeast for better tolerance to extreme temperatures, pH, or high concentrations of toxic products, which is essential for industrial fermentation.

How much does Metabolic Engineering services cost?

The cost of Metabolic Engineering services depends on the project scope, complexity of the target compound, the host organism chosen, and the required yield optimization. We provide customized quotes after a detailed discussion of your specific research objectives.

Do your engineered strains meet regulatory standards?

We adhere to high quality control standards in all strain construction and optimization processes. While we do not handle final regulatory approval, our detailed documentation and compliance with best laboratory practices ensure your engineered strains are prepared for necessary regulatory filings (e.g., GRAS, FDA).

What to look for when selecting the best gene editing service?

We provide various gene editing services such as CRISPR-sgRNA library generation, stable transformation cell line generation, gene knockout cell line generation, and gene point mutation cell line generation. Users are free to select the type of service that suits their research.

Does gene editing allow customisability?

Yes, we offer very customised gene editing solutions such as AAV vector capsid directed evolution, mRNA vector gene delivery, library creation, promoter evolution and screening, etc.

What is the process for keeping data private and confidential?

We adhere to the data privacy policy completely, and all customer data and experimental data are kept confidential.

0

There is no product in your cart.