Home / Services / Synthetic Biology Chassis Development / Bacterial Chassis Engineering / Pseudomonas putida Genome Editing & Metabolic Engineering Solutions / Pseudomonas putida Protein Expression and Purification Services

Pseudomonas putida Protein Expression and Purification Services

CD Biosynsis offers specialized Protein Expression and Purification Services utilizing the versatile Pseudomonas putida platform. P. putida serves as an excellent intermediate host, bridging the gap between simple prokaryotes (like E. coli) and complex eukaryotes. It possesses superior features such as high respiratory capacity, intrinsic robustness, and suitability for complex protein folding and production of toxic metabolites. Our service covers the entire workflow: gene synthesis and vector construction, optimized fermentation, and multi-step purification (chromatography), ensuring the delivery of high-yield, high-purity, and biologically active recombinant proteins, particularly those requiring specific redox conditions or post-translational modifications (PTMs) typical of aerobic systems.

Get a Quote
Service Overview Host Advantages Integrated Workflow Expression Optimization Purification Technology FAQs

High-Yield, Active Protein Production in a Robust Host

Recombinant protein production often faces challenges such as low yield, poor solubility, and incorrect folding when using standard hosts like E. coli, especially for complex enzymes, cytochrome P450s, or proteins involved in redox processes. P. putida offers a superior oxidative environment and sophisticated membrane systems, making it highly effective for these demanding proteins. Our platform is optimized to exploit P. putida's unique metabolic features, using tailored expression vectors and fermentation strategies (e.g., high-cell-density culture) to dramatically increase the expression level of your target protein while maintaining its native conformation and biological activity.

Key Advantages of the P. putida Expression System

Improved Protein Folding High Cell Density & Robustness Specific PTM Compatibility

Improved Protein Folding and Solubility

Reducing Inclusion Body Formation

Aerobic Environment

P. putida’s efficient aerobic metabolism supports better disulfide bond formation and protein folding, reducing aggregation into inactive inclusion bodies.

Lower Growth Stress

Compared to fast-growing E. coli, controlled growth in P. putida allows more time for proper protein maturation and quality control.

High Cell Density and System Robustness

Suitable for Industrial Scale-Up

Robust Physiology

High tolerance to temperature, pH fluctuations, and high concentrations of metabolic products, ideal for large-scale fermentation.

Efficient Biocatalysis

Superior respiratory chain and energy generation capacity support the high energy demands of expressing large amounts of recombinant protein.

Specific PTM Compatibility and Co-expression

Complex Enzyme Production

P450 Co-expression

P. putida can successfully co-express necessary reductases and electron transport components for active cytochrome P450 enzymes.

Specific Post-Translational Modifications (PTMs)

Capability to perform specific PTMs not available in standard E. coli strains, enhancing biological relevance.

Integrated Expression and Purification Workflow

Our comprehensive service ensures a seamless transition from gene sequence to purified, active protein.

1. Gene & Vector Optimization

2. Strain Transformation & HCDC

3. Cell Lysis & Extraction

4. Multi-Step Purification

Codon optimization for maximal expression in P. putida.

Construction of custom expression vectors (e.g., based on PTL or pSEVA systems) with strong, inducible promoters (e.g., Ptet, Prha).

Addition of purification tags (His-tag, GST, Strep-tag) and cleavage sites (e.g., TEV protease).

Transformation of the expression vector into the target P. putida chassis (e.g., KT2440 derivatives).

Optimization of High-Cell-Density Culture (HCDC) fermentation parameters (media, induction time, temperature, pH) for maximum yield.

  • Harvesting: Centrifugation of high-density culture.
  • Lysis: Optimized mechanical or chemical lysis protocol to ensure complete release of soluble protein while minimizing protein denaturation.
  • Insolubility Treatment: Refolding strategies for proteins found in inclusion bodies (if necessary).

Affinity Chromatography (e.g., IMAC for His-tagged proteins) for initial capture and high-fold enrichment.

Polishing steps: Size Exclusion Chromatography (SEC) or Ion Exchange Chromatography (IEX) to achieve high purity (typically >95%).

QC: SDS-PAGE and Western Blot for purity, and MS/Activity Assay for functional verification.

Advanced Expression and Culture Optimization

High-Copy Inducible Vectors

Use of robust, broad-host-range plasmids designed to maintain stability and high copy number in P. putida under selection.

Automated HCDC Fermentation

Precise monitoring and control of Dissolved Oxygen (DO), feeding rate, and pH in bioreactors to ensure optimal cell viability and protein yield.

Co-factor Supply Optimization

Media supplementation or pathway engineering to ensure sufficient supply of critical cofactors (e.g., heme, FAD, NAD(P)H) for complex enzymes.

FAQs About P. putida Protein Expression Services

Got questions about your protein project?

Contact Us

What types of proteins benefit most from P. putida expression?

Proteins that are typically difficult to express actively in E. coli, such as complex multi-domain enzymes, redox-dependent proteins (e.g., Cytochrome P450s), and certain membrane proteins, benefit significantly from P. putida’s robust aerobic system.

What is the typical purity level guaranteed?

We typically guarantee a minimum purity of 95% for research-grade proteins, with the capability to achieve >98% homogeneity depending on the client’s final application requirements (e.g., crystallography).

Do you offer endotoxin removal?

Yes. As P. putida is a Gram-negative bacterium, endotoxin removal is a standard option. We use specialized chromatography (e.g., endotoxin removal resin) to ensure the final product meets low endotoxin requirements for cellular or animal studies.

What information is required to start a project?

We primarily need the target protein sequence (amino acid or nucleotide), the desired purity level, the final yield goal, and any known specific requirements (e.g., inclusion of cofactors, specific buffer conditions).