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Recombinant Protein Production

Pichia pastoris Protein Expression and Purification Services

From gene synthesis to purified protein, we provide end-to-end Pichia pastoris expression with scalable fermentation and robust quality control.

  • Codon-optimized gene design for Pichia
  • High-yield secretory expression into culture medium
  • Multi-step purification with QC documentation

Proven Pichia Platform

Our integrated service combines vector engineering, clone screening, fed-batch fermentation, and downstream purification to deliver research- to production-ready protein samples under a single project plan.

  • Methanol-inducible or constitutive promoters
  • Alpha-factor and alternative secretion signals
  • Shake-flask to bioreactor scale-up
Efficient Secretion
Scalable Fermentation
Robust QC
Our Approach

We deploy a modular workflow that adapts to your protein target, from early feasibility to process transfer. Pichia pastoris is a methylotrophic yeast widely used for recombinant protein production. Our service integrates gene design, clone screening, fermentation, and purification to deliver purified protein with eukaryotic post‑translational modifications, secretion into the medium, and scalability from shake‑flask to pilot bioreactor.

What You Receive

Standard Deliverables

Each project delivers purified protein and associated documentation according to your specifications.

Samples & Documentation

  • Purified protein in buffer of choice (quantity as scoped)
  • SDS-PAGE and Western blot analysis reports
  • Batch record with fermentation and purification parameters
  • Certificate of Analysis (purity, identity, concentration)

Strains & Process Information

  • Stably integrated Pichia pastoris production strain
  • Cryopreserved glycerol stock of lead clone
  • Expression vector sequence and map
  • Fermentation and purification process description
Project Parameters

Service Scope

Scope is tailored to your protein target and intended application; typical parameters are listed below.

Parameter Typical project scope
Gene of interest length Scoped per project after consultation
Promoter type Methanol-inducible AOX1 or constitutive GAP; others upon request
Secretion signal α-factor (S. cerevisiae) or native Pichia signal; synthetic options
Expression scale Scoped per project after consultation
Purification method Affinity (His-tag, other), ion exchange, HIC; custom as scoped
Quality control SDS-PAGE, Western blot, HPLC-SEC, endotoxin (if required)
How It Works

Project Workflow

A step-by-step process from gene design to purified protein delivery.

Gene Design & Vector Cloning

We codon-evaluate your target gene for Pichia pastoris and clone it into an expression vector with promoter and secretion signal of your choice. Multiple constructs are generated for screening.

Transformation & Clone Screening

Constructs are electroporated into Pichia pastoris. We screen up to 48 clones in microtiter plates to identify high-expressing integrants based on secreted protein yield and quality.

Expression Optimization

Lead clones are tested in small-scale shake flasks under different induction conditions. Methanol concentration, pH, temperature, and feed rate are evaluated to evaluate productivity.

Fermentation & Harvest

The optimized process is scaled to a fed-batch bioreactor. Cells are grown to high density, induced, and culture supernatant is harvested by centrifugation and filtration.

Purification & QC Delivery

Clarified supernatant undergoes multi-step chromatography. Purified protein is characterized by SDS-PAGE, Western blot, and HPLC-SEC. A final batch report and certificate of analysis are issued.

Applications

Recombinant Enzymes & Antigens

Produce functional enzymes, vaccine antigens, and diagnostic proteins with eukaryotic folding and glycosylation.

  • Enzymatic activity assays
  • Binding studies
  • Immunogen production

Therapeutic Protein Candidates

Generate leads for protein therapeutics, including growth factors, cytokines, and antibody fragments, in a scalable yeast system.

  • Cytokine and hormone candidates
  • Antibody fragment candidates
  • Lead optimization studies

Biocatalysts & Feed Enzymes

Develop high‑yield production strains for industrial enzymes used in food, feed, and chemical manufacturing.

  • Lipases, proteases, cellulases
  • Secretion into medium simplifies downstream
  • Process transfer to production facilities
Frequently Asked Questions
  • Pichia pastoris is well‑suited for secreted, soluble proteins including enzymes, hormones, antibody fragments, and vaccine antigens. It can also produce membrane‑associated proteins when scoped. The system is particularly effective for proteins requiring disulfide bridges and simple N‑glycosylation.

  • A standard project from gene synthesis to purified protein typically takes a timeline confirmed during project scoping, depending on the complexity of the target, clone screening requirements, and scale of fermentation. Timelines are scoped during project kickoff.

  • We perform SDS‑PAGE, Western blot, and HPLC‑size exclusion chromatography as routine QC. Additional assays (e.g., activity, endotoxin, N‑terminal sequencing) can be included when scoped. A certificate of analysis is provided with each shipment.

  • Yes. We have experience scaling from shake flasks to pilot‑scale bioreactors. Large‑scale runs are scoped per project, and we provide a process description suitable for technology transfer to your facility or a CMO.

  • If a project involves animal studies (e.g., immunogen production for antibody generation), those activities are conducted under protocols reviewed and approved by an Institutional Animal Care and Use Committee (IACUC) or equivalent ethics oversight body. All work is performed in accordance with applicable regulations.

Scientific Literature

References

  1. Unver Y, Dagci I. Komagataella phaffii (Pichia pastoris) as a Powerful Yeast Expression System for Biologics Production. Frontiers in bioscience (Elite edition). 2024;16(2):19. View on PubMed
  2. Naumann TA, Sollenberger KG, Hao G. Production of selenomethionine labeled polyglycine hydrolases in Pichia pastoris. Protein expression and purification. 2022;194:106076. View on PubMed
  3. Karbalaei M, Rezaee SA, Farsiani H. Pichia pastoris: A highly successful expression system for optimal synthesis of heterologous proteins. Journal of cellular physiology. 2020;235(9):5867-5881. View on PubMed
  4. Matsuzaki Y, Kajiwara K, Aoki W, et al. Production of Single-Domain Antibodies in Pichia pastoris. Methods in molecular biology (Clifton, N.J.). 2022;2446:181-203. View on PubMed
  5. Chronopoulou S, Tsochantaridis I, Tokamani M, et al. Expression and purification of human interferon alpha 2a (IFNα2a) in the methylotrophic yeast Pichia pastoris. Protein expression and purification. 2023;211:106339. View on PubMed

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